Supplemental Material
Github
Most code and presentations can be found on our Github account.
Local Sensitivity Analysis
This presentation includes various methods for a local analysis to determine the sensitivity of a mathematical model to variations in the parameter values.
Software
SIR Code
This software contains code for a general SIR model, a sensitivity analysis of the parameters using a finite difference Jacobian, various optimization techniques (fminsearch, Levenberg-Marquardt, nlinfit), prediction and confidence intervals, and delayed rejection adaptive metropolis (DRAM).
1D Code
This software contains code for a 1D model of pulse wave propagation in an elastic vessel. The code solves a hyperbolic system of PDEs to simulate pressure, flow and vessels cross-sectional area along the length of the vessel. A ReadMe.txt file is included for a description of files inside the zip folder.
Data
Syncope Data
Repository with Heart rate and Blood pressure syncope data from control subjects and patients with Cardioinhibition, Vasodepression, POTS, and Mixed syncope.